mavis/overlay
check_overlay_args()
parse the overlay options and check the formatting
def check_overlay_args(args, parser):
Args
- args
- parser
main()
generates an overlay diagram
def main(
gene_name: str,
output: str,
config: Dict,
buffer_length: int,
read_depth_plots,
markers: List[Tuple[str, int, int]],
ymax_color='#FF0000',
**kwargs,
):
Args
- gene_name (
str
) - output (
str
) - config (
Dict
) - buffer_length (
int
) - read_depth_plots
- markers (
List[Tuple[str, int, int]]
) - ymax_color