main module¶
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mavis.summary.main.
main
(inputs, output, annotations, dgv_annotation=None, filter_cdna_synon=True, filter_protein_synon=False, filter_min_remapped_reads=5, filter_min_spanning_reads=5, filter_min_flanking_reads=10, filter_min_split_reads=5, filter_trans_homopolymers=True, filter_min_linking_split_reads=1, filter_min_complexity=0.2, flanking_call_distance=50, split_call_distance=20, contig_call_distance=10, spanning_call_distance=20, start_time=1558720095, **kwargs)[source]¶