mavis.cluster.main

mavis.cluster.main.split_clusters()

For a set of clusters creates a bed file representation of all clusters. Also splits the clusters evenly into multiple files based on the user parameters (min_clusters_per_file, max_files)

def split_clusters(
    clusters, outputdir, batch_id, min_clusters_per_file=0, max_files=1, write_bed_summary=True
):

Args

• clusters
• outputdir
• batch_id
• min_clusters_per_file
• max_files
• write_bed_summary

Returns

• list: of output file names (not including the bed file)